Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_4409 | Not Available | Negative | 4993862 - 4994194 | 13185.8 |
| hypothetical protein | BCL90_4410 | Not Available | Positive | 4994284 - 4994541 | 9369.78 |
| tetr family transcriptional regulator | BCL90_4411 | Not Available | Negative | 4994513 - 4995136 | 24173.7 |
| hypothetical protein | BCL90_4412 | Not Available | Positive | 4995330 - 4995470 | 4901.27 |
| tonb-linked susc/raga family outer membrane protein | BCL90_4413 | Not Available | Positive | 4995558 - 4998758 | 118020.0 |
| susd-like starch-binding protein associating with outer membrane | BCL90_4414 | Not Available | Positive | 4998770 - 5000227 | 54625.7 |
| type i phosphodiesterase/nucleotide pyrophosphatase | BCL90_4415 | Not Available | Positive | 5000305 - 5001540 | 47014.1 |
| hypothetical protein | BCL90_4416 | Not Available | Positive | 5001820 - 5002509 | 25985.7 |
| pap2 superfamily protein | BCL90_4417 | Not Available | Negative | 5002555 - 5003496 | 36424.9 |
| fatty acid hydroxylase family protein | BCL90_4418 | Not Available | Negative | 5003498 - 5004118 | 24581.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
