Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf4843 | BCL90_4399 | Not Available | Negative | 4980562 - 4981323 | 28374.1 |
| susd-like starch-binding protein associating with outer membrane | BCL90_4400 | Not Available | Negative | 4981313 - 4982746 | 52556.7 |
| tonb-linked susc/raga family outer membrane protein | BCL90_4401 | Not Available | Negative | 4982771 - 4986028 | 119102.0 |
| fecr family protein | BCL90_4402 | Not Available | Negative | 4986301 - 4987494 | 44015.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_4403 | Not Available | Negative | 4987590 - 4988189 | 23349.6 |
| lysr family transcriptional regulator | BCL90_4404 | Not Available | Negative | 4988439 - 4989326 | 33836.2 |
| trna (cmo5u34)-methyltransferase | BCL90_4405 | Not Available | Positive | 4989417 - 4990139 | 26876.7 |
| hypothetical protein | BCL90_4406 | Not Available | Negative | 4990281 - 4990517 | 8952.74 |
| pit family inorganic phosphate transporter | BCL90_4407 | Not Available | Positive | 4990889 - 4992328 | 51826.6 |
| nucleotide-binding universal stress uspa family protein | BCL90_4408 | Not Available | Positive | 4992355 - 4993176 | 30342.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
