Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase is166 family protein | BCL90_4389 | Not Available | Positive | 4964842 - 4965264 | 16465.7 |
| uncharacterized protein duf5013 | BCL90_4390 | Not Available | Negative | 4965635 - 4966858 | 44388.8 |
| uncharacterized protein duf5126 | BCL90_4391 | Not Available | Negative | 4966889 - 4968091 | 44661.5 |
| putative outer membrane starch-binding protein | BCL90_4392 | Not Available | Negative | 4968115 - 4970061 | 74065.6 |
| tonb-linked susc/raga family outer membrane protein | BCL90_4393 | Not Available | Negative | 4970079 - 4973423 | 123747.0 |
| hypothetical protein | BCL90_4394 | Not Available | Positive | 4974169 - 4974726 | 20401.1 |
| hypothetical protein | BCL90_4395 | Not Available | Negative | 4974915 - 4975412 | 19338.3 |
| thioredoxin-related protein | BCL90_4396 | Not Available | Positive | 4975932 - 4977149 | 46110.1 |
| thiol-disulfide isomerase/thioredoxin | BCL90_4397 | Not Available | Negative | 4977911 - 4979086 | 44227.5 |
| pkd family protein | BCL90_4398 | Not Available | Negative | 4979127 - 4980551 | 53545.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
