Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 4913068 - 4913142 | Not Available |
| 4'-phosphopantetheinyl transferase | BCL90_4367 | Not Available | Negative | 4914182 - 4914814 | 24487.6 |
| thioester reductase-like protein | BCL90_4368 | Not Available | Negative | 4915011 - 4919327 | 162777.0 |
| nadp-dependent 3-hydroxy acid dehydrogenase ydfg | BCL90_4369 | Not Available | Negative | 4919394 - 4920167 | 27694.5 |
| hypothetical protein | BCL90_4370 | Not Available | Negative | 4920164 - 4920562 | 14996.1 |
| penicillin amidase | BCL90_4371 | Not Available | Negative | 4920583 - 4922988 | 90818.6 |
| outer membrane receptor protein involved in fe transport | BCL90_4372 | Not Available | Negative | 4923076 - 4925514 | 90695.9 |
| surfactin synthase thioesterase subunit | BCL90_4373 | Not Available | Negative | 4925582 - 4926298 | 26806.5 |
| putative atp-binding cassette transporter | BCL90_4374 | Not Available | Negative | 4926314 - 4927978 | 62154.3 |
| l-ascorbate metabolism protein ulag (beta-lactamase superfamily) | BCL90_4375 | Not Available | Negative | 4928010 - 4929626 | 61747.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
