Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uma2 family endonuclease | BCL90_4345 | Not Available | Positive | 4895141 - 4895734 | 22911.0 |
| uma2 family endonuclease | BCL90_4346 | Not Available | Positive | 4895879 - 4896484 | 23356.6 |
| hypothetical protein | BCL90_4347 | Not Available | Negative | 4896540 - 4896686 | 5797.04 |
| putative mrna 3-end processing factor | BCL90_4348 | Not Available | Negative | 4896791 - 4897735 | 36001.1 |
| dephospho-coa kinase | BCL90_4349 | Not Available | Negative | 4897779 - 4898396 | 22746.4 |
| ybbr domain-containing protein | BCL90_4350 | Not Available | Negative | 4898396 - 4899343 | 36216.2 |
| preprotein translocase subunit yajc | BCL90_4351 | Not Available | Negative | 4899464 - 4899787 | 11595.4 |
| uncharacterized protein duf1573 | BCL90_4352 | Not Available | Negative | 4899855 - 4900313 | 16039.3 |
| nusb antitermination factor | BCL90_4353 | Not Available | Negative | 4900316 - 4901266 | 36892.7 |
| leucine dehydrogenase | BCL90_4354 | Not Available | Negative | 4901316 - 4902404 | 39244.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
