Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-i ubiquinol oxidase subunit 1 apoprotein | BCL90_4335 | Not Available | Negative | 4885311 - 4886636 | 48863.6 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | BCL90_4336 | Not Available | Negative | 4886956 - 4887855 | 33369.4 |
| hypothetical protein | BCL90_4337 | Not Available | Negative | 4887929 - 4888132 | 7420.5 |
| hypothetical protein | BCL90_4338 | Not Available | Positive | 4888264 - 4888824 | 22750.3 |
| hypothetical protein | BCL90_4339 | Not Available | Negative | 4889081 - 4889284 | 8111.71 |
| cysteine desulfurase | BCL90_4340 | Not Available | Negative | 4889919 - 4891067 | 41989.1 |
| phosphomannomutase | BCL90_4341 | Not Available | Negative | 4891197 - 4892654 | 52935.8 |
| methyltransferase family protein | BCL90_4342 | Not Available | Positive | 4892957 - 4893688 | 28821.4 |
| undecaprenyl-diphosphatase | BCL90_4343 | Not Available | Positive | 4893685 - 4894248 | 21494.9 |
| zinc transporter zupt | BCL90_4344 | Not Available | Positive | 4894252 - 4894968 | 26152.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
