Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secd/secf fusion protein | BCL90_4325 | Not Available | Positive | 4872440 - 4875421 | 107318.0 |
| nadh dehydrogenase | BCL90_4326 | Not Available | Positive | 4875872 - 4877191 | 49134.6 |
| hydroxymethylglutaryl-coa lyase | BCL90_4327 | Not Available | Positive | 4877420 - 4878280 | 31302.5 |
| putative endonuclease | BCL90_4328 | Not Available | Negative | 4878410 - 4878691 | 11061.1 |
| putative gnat family n-acyltransferase | BCL90_4329 | Not Available | Negative | 4878798 - 4879220 | 16000.9 |
| low affinity fe/cu permease | BCL90_4330 | Not Available | Negative | 4879195 - 4879701 | 18832.5 |
| fructose-bisphosphate aldolase | BCL90_4331 | Not Available | Negative | 4879840 - 4880919 | 39781.3 |
| acetyl-coa carboxylase carboxyl transferase subunit beta | BCL90_4332 | Not Available | Positive | 4881230 - 4882075 | 31196.0 |
| peptidase m28-like protein | BCL90_4333 | Not Available | Positive | 4882457 - 4884004 | 56626.4 |
| cytochrome bd-i ubiquinol oxidase subunit 2 apoprotein | BCL90_4334 | Not Available | Negative | 4884214 - 4885218 | 37622.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
