Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_4315 | Not Available | Negative | 4864342 - 4864638 | 10790.2 |
| hypothetical protein | BCL90_4316 | Not Available | Negative | 4864700 - 4865422 | 26600.2 |
| hypothetical protein | BCL90_4317 | Not Available | Positive | 4865924 - 4867177 | 46446.2 |
| o-succinylhomoserine sulfhydrylase | BCL90_4318 | Not Available | Negative | 4867251 - 4868417 | 42883.3 |
| putative redox protein | BCL90_4319 | Not Available | Negative | 4868563 - 4868988 | 15754.1 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | BCL90_4320 | Not Available | Negative | 4869061 - 4869864 | 29761.8 |
| thymidylate synthase | BCL90_4321 | Not Available | Positive | 4870117 - 4870911 | 30194.2 |
| hypothetical protein | BCL90_4322 | Not Available | Positive | 4870932 - 4871135 | 7433.03 |
| mrna interferase yafq | BCL90_4323 | Not Available | Positive | 4871141 - 4871413 | 10877.1 |
| dihydrofolate reductase | BCL90_4324 | Not Available | Positive | 4871438 - 4871929 | 18556.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
