Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative membrane protein | BCL90_4292 | Not Available | Positive | 4838481 - 4839992 | 57640.0 |
| uncharacterized protein ybjt (duf2867 family) | BCL90_4293 | Not Available | Negative | 4840039 - 4840923 | 31560.7 |
| hxlr family transcriptional regulator | BCL90_4294 | Not Available | Positive | 4841005 - 4841358 | 13209.2 |
| hypothetical protein | BCL90_4296 | Not Available | Negative | 4841710 - 4842033 | 12024.6 |
| dna helicase-2/atp-dependent dna helicase pcra | BCL90_4297 | Not Available | Positive | 4842412 - 4844805 | 90561.0 |
| condensin subunit smc | BCL90_4298 | Not Available | Positive | 4845063 - 4848602 | 135492.0 |
| uncharacterized protein duf2281 | BCL90_4300 | Not Available | Positive | 4848838 - 4849047 | 7850.62 |
| pin domain nuclease of toxin-antitoxin system | BCL90_4301 | Not Available | Positive | 4849047 - 4849457 | 15771.0 |
| peptidase m28-like protein | BCL90_4302 | Not Available | Positive | 4849470 - 4850444 | 35899.8 |
| putative transcriptional regulator | BCL90_4303 | Not Available | Positive | 4850623 - 4850994 | 14291.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
