Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific recombinase xerd | BCL90_4279 | Not Available | Negative | 4823450 - 4824376 | 35747.9 |
| type i restriction enzyme s subunit | BCL90_4281 | Not Available | Negative | 4825708 - 4826937 | 46965.2 |
| type i restriction enzyme m protein | BCL90_4282 | Not Available | Negative | 4826988 - 4828571 | 60123.5 |
| uncharacterized protein duf3892 | BCL90_4283 | Not Available | Negative | 4828692 - 4828979 | 10484.3 |
| hypothetical protein | BCL90_4284 | Not Available | Negative | 4829094 - 4829912 | 30548.1 |
| putative mfs family arabinose efflux permease | BCL90_4285 | Not Available | Positive | 4831780 - 4833027 | 46240.9 |
| glycosyl hydrolase family 43 | BCL90_4286 | Not Available | Negative | 4833048 - 4834028 | 36929.9 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like protein | BCL90_4289 | Not Available | Negative | 4835247 - 4836617 | 50552.2 |
| putative secreted protein (por secretion system target) | BCL90_4290 | Not Available | Positive | 4836907 - 4837884 | 36300.0 |
| hypothetical protein | BCL90_4291 | Not Available | Positive | 4837940 - 4838494 | 21081.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
