Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | BCL90_4269 | Not Available | Negative | 4813462 - 4814064 | 21852.3 |
| hypothetical protein | BCL90_4270 | Not Available | Negative | 4814296 - 4814622 | 12672.7 |
| hypothetical protein | BCL90_4271 | Not Available | Negative | 4814792 - 4815022 | 8528.35 |
| helix-turn-helix protein | BCL90_4272 | Not Available | Positive | 4815810 - 4816067 | 9748.82 |
| nhaa family na+:h+ antiporter | BCL90_4273 | Not Available | Positive | 4816651 - 4817847 | 43000.9 |
| hxlr family transcriptional regulator | BCL90_4274 | Not Available | Negative | 4818190 - 4818552 | 13614.8 |
| putative nadph-quinone reductase | BCL90_4275 | Not Available | Positive | 4818651 - 4819181 | 20772.8 |
| type i restriction enzyme r subunit | BCL90_4276 | Not Available | Negative | 4819256 - 4822141 | 112578.0 |
| abortive infection bacteriophage resistance protein | BCL90_4277 | Not Available | Negative | 4822142 - 4823041 | 35325.6 |
| hypothetical protein | BCL90_4278 | Not Available | Negative | 4823031 - 4823315 | 10652.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
