Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein duf1573 | BCL90_4259 | Not Available | Positive | 4803049 - 4803441 | 13828.8 |
| aspartate aminotransferase | BCL90_4260 | Not Available | Positive | 4803504 - 4804703 | 44359.2 |
| hypothetical protein | BCL90_4261 | Not Available | Positive | 4804958 - 4805227 | 9979.08 |
| hypothetical protein | BCL90_4262 | Not Available | Positive | 4805531 - 4806736 | 46291.9 |
| hypothetical protein | BCL90_4263 | Not Available | Negative | 4806733 - 4806963 | 9139.03 |
| crp-like camp-binding protein | BCL90_4264 | Not Available | Positive | 4807284 - 4807874 | 22450.1 |
| doxx-like protein | BCL90_4265 | Not Available | Positive | 4808019 - 4808456 | 16323.5 |
| hypothetical protein | BCL90_4266 | Not Available | Positive | 4808587 - 4808886 | 10667.4 |
| susd-like starch-binding protein associating with outer membrane | BCL90_4267 | Not Available | Negative | 4808926 - 4810266 | 50458.0 |
| tonb-linked susc/raga family outer membrane protein | BCL90_4268 | Not Available | Negative | 4810277 - 4813459 | 117113.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
