Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-like dna-binding protein | BCL90_4238 | Not Available | Negative | 4780621 - 4781397 | 29880.5 |
| cspa family cold shock protein | BCL90_4239 | Not Available | Negative | 4781606 - 4781803 | 6989.38 |
| cspa family cold shock protein | BCL90_4240 | Not Available | Negative | 4781808 - 4781996 | 6918.28 |
| hypothetical protein | BCL90_4241 | Not Available | Negative | 4782409 - 4782501 | 3220.13 |
| glucose/arabinose dehydrogenase | BCL90_4242 | Not Available | Positive | 4782778 - 4785489 | 99905.9 |
| putative hydrolase of the had superfamily | BCL90_4243 | Not Available | Positive | 4786154 - 4786798 | 24623.2 |
| hypothetical protein | BCL90_4244 | Not Available | Positive | 4786807 - 4787127 | 12501.2 |
| l-proline dehydrogenase | BCL90_4246 | Not Available | Negative | 4787461 - 4788645 | 44982.2 |
| ribosome-associated protein | BCL90_4247 | Not Available | Positive | 4788739 - 4788945 | 7541.34 |
| 3-dehydroquinate synthase | BCL90_4248 | Not Available | Positive | 4788945 - 4790003 | 39195.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
