Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-l-fucosidase | BCL90_4227 | Not Available | Positive | 4768684 - 4770453 | 66489.1 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_4228 | Not Available | Positive | 4771191 - 4771499 | 12215.7 |
| hypothetical protein | BCL90_4229 | Not Available | Positive | 4771577 - 4771843 | 9815.92 |
| response regulator receiver domain-containing protein | BCL90_4230 | Not Available | Positive | 4771903 - 4772280 | 14001.0 |
| crp-like camp-binding protein | BCL90_4231 | Not Available | Positive | 4772878 - 4773453 | 22038.6 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | BCL90_4232 | Not Available | Positive | 4773536 - 4773925 | 14790.5 |
| hypothetical protein | BCL90_4233 | Not Available | Positive | 4774245 - 4775351 | 42982.9 |
| Trna-met | Not Available | Not Available | Positive | 4775820 - 4775893 | Not Available |
| uvrd-like helicase family protein | BCL90_4236 | Not Available | Positive | 4776120 - 4778213 | 78651.2 |
| putative chaperone protein | BCL90_4237 | Not Available | Positive | 4778288 - 4779556 | 47580.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
