Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine biosynthesis lipoprotein apbe | BCL90_4207 | Not Available | Negative | 4747312 - 4748844 | 55930.8 |
| 2-keto-4-methylthiobutyrate aminotransferase | BCL90_4208 | Not Available | Positive | 4749116 - 4750261 | 42866.8 |
| putative amidohydrolase | BCL90_4209 | Not Available | Positive | 4750282 - 4751085 | 31351.8 |
| asparaginase | BCL90_4210 | Not Available | Positive | 4751337 - 4752371 | 37123.8 |
| copper homeostasis protein | BCL90_4211 | Not Available | Positive | 4752408 - 4753163 | 27300.8 |
| hypothetical protein | BCL90_4212 | Not Available | Positive | 4753306 - 4753830 | 19125.2 |
| uncharacterized protein duf983 | BCL90_4213 | Not Available | Negative | 4753888 - 4754280 | 14719.1 |
| crp-like camp-binding protein | BCL90_4214 | Not Available | Negative | 4754413 - 4754994 | 22060.1 |
| d-alanine-d-alanine ligase | BCL90_4215 | Not Available | Negative | 4755059 - 4756045 | 36284.6 |
| beta-lactam-binding protein with pasta domain | BCL90_4216 | Not Available | Positive | 4756248 - 4757018 | 27950.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
