Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipid/cholesterol/gamma-hch transport system permease protein | BCL90_4175 | Not Available | Positive | 4710151 - 4710921 | 27676.6 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | BCL90_4176 | Not Available | Positive | 4710928 - 4711671 | 27679.5 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | BCL90_4177 | Not Available | Positive | 4711683 - 4712690 | 36485.2 |
| nucleotide-binding universal stress uspa family protein | BCL90_4178 | Not Available | Positive | 4713150 - 4713986 | 31775.9 |
| uncharacterized membrane protein yoak (upf0700 family) | BCL90_4179 | Not Available | Positive | 4714395 - 4715138 | 27983.7 |
| dknyy family protein | BCL90_4180 | Not Available | Negative | 4715237 - 4716769 | 58139.5 |
| putative alpha-1,2-mannosidase | BCL90_4181 | Not Available | Negative | 4717045 - 4719192 | 79907.0 |
| alpha-l-fucosidase 2 | BCL90_4182 | Not Available | Positive | 4719934 - 4722204 | 85737.4 |
| hypothetical protein | BCL90_4183 | Not Available | Negative | 4722725 - 4722919 | 7142.72 |
| hypothetical protein | BCL90_4184 | Not Available | Negative | 4722916 - 4724103 | 43656.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
