Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_4162 | Not Available | Negative | 4692509 - 4693339 | 31016.9 |
| starch phosphorylase | BCL90_4163 | Not Available | Negative | 4693483 - 4695138 | 62282.3 |
| bon domain-containing protein | BCL90_4164 | Not Available | Negative | 4695464 - 4695877 | 15394.0 |
| xylulose-5-phosphate/fructose-6-phosphate phosphoketolase | BCL90_4165 | Not Available | Negative | 4695918 - 4698278 | 88572.0 |
| nucleotide-binding universal stress uspa family protein | BCL90_4166 | Not Available | Negative | 4698550 - 4699407 | 32161.1 |
| ca2+-transporting atpase | BCL90_4167 | Not Available | Negative | 4699472 - 4702162 | 97330.5 |
| pas domain s-box-containing protein | BCL90_4168 | Not Available | Positive | 4702418 - 4703614 | 44986.3 |
| crp-like camp-binding protein | BCL90_4169 | Not Available | Positive | 4703611 - 4704663 | 39756.1 |
| ca2+-transporting atpase | BCL90_4170 | Not Available | Negative | 4704670 - 4707303 | 97503.2 |
| nucleotide-binding universal stress uspa family protein | BCL90_4173 | Not Available | Negative | 4708302 - 4709174 | 32059.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
