Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | BCL90_4141 | Not Available | Negative | 4661822 - 4664074 | 86143.4 |
| thioredoxin | BCL90_4142 | Not Available | Negative | 4664061 - 4665155 | 42013.8 |
| uncharacterized protein duf5118 | BCL90_4143 | Not Available | Negative | 4665158 - 4667506 | 87766.8 |
| uncharacterized protein duf5118 | BCL90_4144 | Not Available | Negative | 4667533 - 4669956 | 92132.5 |
| hypothetical protein | BCL90_4145 | Not Available | Negative | 4669983 - 4670981 | 37738.5 |
| susd-like starch-binding protein associating with outer membrane | BCL90_4146 | Not Available | Negative | 4670953 - 4672473 | 56720.3 |
| tonb-linked susc/raga family outer membrane protein | BCL90_4147 | Not Available | Negative | 4672491 - 4676111 | 133443.0 |
| fecr family protein | BCL90_4148 | Not Available | Negative | 4676236 - 4677417 | 43904.6 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_4149 | Not Available | Positive | 4677571 - 4678161 | 22739.9 |
| hypothetical protein | BCL90_4150 | Not Available | Negative | 4678172 - 4680043 | 70614.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
