Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacid dehydratase | BCL90_4111 | Not Available | Negative | 4616024 - 4617739 | 61829.9 |
| 2-dehydro-3-deoxy-d-arabinonate dehydratase | BCL90_4112 | Not Available | Negative | 4617871 - 4618707 | 31174.8 |
| arac family transcriptional regulator | BCL90_4113 | Not Available | Negative | 4619546 - 4620433 | 34022.0 |
| tonb-linked susc/raga family outer membrane protein | BCL90_4114 | Not Available | Positive | 4620996 - 4624169 | 113839.0 |
| susd-like starch-binding protein associating with outer membrane | BCL90_4115 | Not Available | Positive | 4624183 - 4625733 | 56085.9 |
| putative dehydrogenase | BCL90_4116 | Not Available | Positive | 4626376 - 4627707 | 49398.9 |
| hypothetical protein | BCL90_4117 | Not Available | Positive | 4627915 - 4628115 | 7235.64 |
| putative outer membrane starch-binding protein | BCL90_4118 | Not Available | Negative | 4628210 - 4629817 | 60435.5 |
| tonb-linked susc/raga family outer membrane protein | BCL90_4119 | Not Available | Negative | 4629835 - 4633062 | 118164.0 |
| zincin-like metallopeptidase toxin 3 of polymorphic toxin system | BCL90_4120 | Not Available | Positive | 4634409 - 4636343 | 71043.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
