Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein (tigr02284 family) | BCL90_4008 | Not Available | Negative | 4506215 - 4506670 | 17090.0 |
| glycosyl transferase family 2 | BCL90_4009 | Not Available | Negative | 4506790 - 4507716 | 35418.6 |
| gxxexxy protein | BCL90_4010 | Not Available | Negative | 4507812 - 4508222 | 15702.5 |
| methyltransferase family protein | BCL90_4011 | Not Available | Negative | 4508480 - 4509241 | 29331.5 |
| hypothetical protein | BCL90_4012 | Not Available | Negative | 4509254 - 4509901 | 24059.7 |
| o-antigen/teichoic acid export membrane protein | BCL90_4013 | Not Available | Negative | 4509898 - 4511223 | 49677.3 |
| hypothetical protein | BCL90_4014 | Not Available | Negative | 4511299 - 4511916 | 21165.3 |
| dinb family protein | BCL90_4015 | Not Available | Negative | 4511958 - 4512476 | 19614.1 |
| uncharacterized protein duf4476 | BCL90_4016 | Not Available | Negative | 4512496 - 4513200 | 27232.5 |
| putative hydrolase of the had superfamily | BCL90_4017 | Not Available | Negative | 4513278 - 4513967 | 26598.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
