Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3988 | Not Available | Negative | 4481606 - 4481911 | 10827.9 |
| hypothetical protein | BCL90_3989 | Not Available | Negative | 4481935 - 4482960 | 38304.6 |
| cubico group peptidase (beta-lactamase class c family) | BCL90_3990 | Not Available | Negative | 4482923 - 4484155 | 47174.5 |
| uncharacterized protein yjlb | BCL90_3991 | Not Available | Negative | 4484224 - 4484775 | 20547.9 |
| gxxexxy protein | BCL90_3992 | Not Available | Positive | 4484975 - 4485355 | 14125.3 |
| uncharacterized protein (duf885 family) | BCL90_3993 | Not Available | Negative | 4485459 - 4487237 | 66842.0 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | BCL90_3994 | Not Available | Negative | 4487401 - 4489080 | 58504.9 |
| pyruvate dehydrogenase e1 component alpha subunit | BCL90_3995 | Not Available | Negative | 4489110 - 4490105 | 37048.3 |
| lipoprotein spr | BCL90_3996 | Not Available | Positive | 4490601 - 4491158 | 20980.0 |
| capsule synthesis protein pga_cap | BCL90_3997 | Not Available | Positive | 4491258 - 4492355 | 40259.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
