Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-linked susc/raga family outer membrane protein | BCL90_3948 | Not Available | Negative | 4436033 - 4439221 | 117032.0 |
| laci family transcriptional regulator | BCL90_3949 | Not Available | Positive | 4439487 - 4440497 | 37750.5 |
| 23s rrna (cytosine1962-c5)-methyltransferase | BCL90_3950 | Not Available | Positive | 4440683 - 4441867 | 44017.7 |
| ahpd family alkylhydroperoxidase | BCL90_3951 | Not Available | Negative | 4441980 - 4442414 | 16225.8 |
| hypothetical protein | BCL90_3952 | Not Available | Positive | 4442586 - 4442807 | 8344.27 |
| crp-like camp-binding protein | BCL90_3953 | Not Available | Negative | 4442756 - 4443325 | 22745.3 |
| glpgli family protein | BCL90_3954 | Not Available | Negative | 4443383 - 4444165 | 29583.4 |
| outer membrane beta-barrel protein | BCL90_3955 | Not Available | Negative | 4444168 - 4447077 | 109105.0 |
| hypothetical protein | BCL90_3956 | Not Available | Positive | 4447445 - 4448083 | 22812.2 |
| aldehyde dehydrogenase (nad+) | BCL90_3957 | Not Available | Negative | 4448174 - 4449715 | 54958.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
