Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter alluvionis strain DSM 19624
Accession NumberRCCK00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative n-acetylmuramidase | BCL90_1660 | Not Available | + | 1907204 - 1907773 | 20576.1 |
| 5s ribosomal rna | Not Available | Not Available | + | 253 - 364 | Not Available |
| Ncrna_class:other | Not Available | Not Available | + | 645 - 742 | Not Available |
| antitoxin component ywqk of ywqjk toxin-antitoxin module | BCL90_0001 | Not Available | - | 122 - 1480 | 51933.5 |
| 23s ribosomal rna | Not Available | Not Available | + | 2621 - 5499 | Not Available |
| two-component sensor histidine kinase | BCL90_0002 | Not Available | - | 2355 - 4604 | 85796.1 |
| arac family transcriptional regulator | BCL90_0003 | Not Available | - | 5032 - 5913 | 34281.2 |
| hypothetical protein | BCL90_0004 | Not Available | - | 6409 - 7299 | 33541.5 |
| 2-iminobutanoate/2-iminopropanoate deaminase | BCL90_0005 | Not Available | - | 7488 - 7925 | 16112.5 |
| Ncrna_class:other | Not Available | Not Available | + | 8279 - 8352 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.