Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-dehydroquinate synthase | BCL90_1034 | Not Available | Positive | 1203835 - 1204998 | 43163.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 1204555 - 1204626 | Not Available |
| hypothetical protein | BCL90_1035 | Not Available | Positive | 1205002 - 1206168 | 43477.9 |
| putative alkp superfamily pyrophosphatase or phosphodiesterase | BCL90_1036 | Not Available | Positive | 1206179 - 1207528 | 50948.0 |
| hypothetical protein | BCL90_1037 | Not Available | Negative | 1207890 - 1208291 | 14868.9 |
| hypothetical protein | BCL90_1039 | Not Available | Negative | 1208619 - 1209263 | 24828.9 |
| altronate hydrolase | BCL90_1041 | Not Available | Negative | 1210396 - 1212033 | 59704.3 |
| fhs family l-fucose permease-like mfs transporter | BCL90_1042 | Not Available | Negative | 1212042 - 1213352 | 47837.4 |
| arac-like dna-binding protein | BCL90_1043 | Not Available | Positive | 1213530 - 1214399 | 33431.2 |
| transcriptional regulator glxa family with amidase domain | BCL90_1044 | Not Available | Negative | 1214827 - 1215786 | 36007.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
