Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | BCL90_1008 | Not Available | Negative | 1179481 - 1181484 | 76777.6 |
| hypothetical protein | BCL90_1009 | Not Available | Positive | 1181920 - 1182540 | 24077.8 |
| hypothetical protein | BCL90_1010 | Not Available | Positive | 1182566 - 1183357 | 28898.4 |
| cubico group peptidase (beta-lactamase class c family) | BCL90_1011 | Not Available | Positive | 1183477 - 1184574 | 41027.8 |
| cubico group peptidase (beta-lactamase class c family) | BCL90_1012 | Not Available | Positive | 1184659 - 1185855 | 45068.2 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | BCL90_1013 | Not Available | Positive | 1185888 - 1186391 | 18918.7 |
| pimeloyl-acp methyl ester carboxylesterase | BCL90_1014 | Not Available | Positive | 1186580 - 1187581 | 37993.3 |
| dna-binding response ompr family regulator | BCL90_1015 | Not Available | Positive | 1187854 - 1188549 | 26420.0 |
| signal transduction histidine kinase | BCL90_1016 | Not Available | Positive | 1188546 - 1189802 | 48642.0 |
| cytochrome b | BCL90_1017 | Not Available | Positive | 1189808 - 1190476 | 24958.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
