Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide isomerase/thioredoxin | BCL90_0998 | Not Available | Positive | 1165384 - 1166919 | 59188.6 |
| hypothetical protein | BCL90_0999 | Not Available | Negative | 1167209 - 1167847 | 23839.4 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_1000 | Not Available | Positive | 1168805 - 1169365 | 22078.3 |
| fecr family protein | BCL90_1001 | Not Available | Positive | 1169444 - 1170616 | 43204.4 |
| tonb-linked susc/raga family outer membrane protein | BCL90_1002 | Not Available | Positive | 1170900 - 1174388 | 129521.0 |
| susd-like starch-binding protein associating with outer membrane | BCL90_1003 | Not Available | Positive | 1174526 - 1175941 | 51995.5 |
| peroxiredoxin | BCL90_1004 | Not Available | Positive | 1176005 - 1177123 | 40578.1 |
| enterochelin esterase-like enzyme | BCL90_1005 | Not Available | Positive | 1177668 - 1178537 | 33137.6 |
| hypothetical protein | BCL90_1006 | Not Available | Negative | 1178667 - 1178792 | 4738.15 |
| luxr family two component transcriptional regulator | BCL90_1007 | Not Available | Negative | 1178859 - 1179488 | 23295.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
