Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| winged helix family two component transcriptional regulator | BCL90_0644 | Not Available | - | 805255 - 805932 | 25314.0 |
| polyketide cyclase/dehydrase/lipid transport protein | BCL90_0645 | Not Available | - | 806512 - 807045 | 19974.6 |
| hemoglobin | BCL90_0646 | Not Available | - | 807107 - 807502 | 15305.5 |
| hypothetical protein | BCL90_0647 | Not Available | - | 807486 - 807926 | 16209.0 |
| aspartyl protease | BCL90_0648 | Not Available | - | 807990 - 808415 | 15867.4 |
| Ncrna_class:other | Not Available | Not Available | + | 808788 - 808888 | Not Available |
| malate dehydrogenase (nad) | BCL90_0649 | Not Available | - | 808631 - 809569 | 33042.3 |
| apolipoprotein d and lipocalin family protein | BCL90_0650 | Not Available | + | 809718 - 810170 | 17893.1 |
| hypothetical protein | BCL90_0651 | Not Available | - | 810293 - 810562 | 10048.3 |
| dna polymerase iii alpha subunit | BCL90_0654 | Not Available | + | 810692 - 815125 | 166898.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
