Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lsu ribosomal protein l10p | BCL90_0617 | Not Available | Positive | 775002 - 775523 | 18904.8 |
| lsu ribosomal protein l12p | BCL90_0618 | Not Available | Positive | 775588 - 775965 | 12809.5 |
| dna-directed rna polymerase subunit beta | BCL90_0619 | Not Available | Positive | 776122 - 779925 | 142262.0 |
| dna-directed rna polymerase subunit beta' | BCL90_0620 | Not Available | Positive | 780013 - 784299 | 159592.0 |
| hypothetical protein | BCL90_0621 | Not Available | Positive | 784393 - 784635 | 8961.14 |
| uncharacterized protein duf3467 | BCL90_0622 | Not Available | Positive | 784709 - 785020 | 11518.8 |
| long-chain fatty acid transport protein | BCL90_0623 | Not Available | Positive | 785098 - 786321 | 44194.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 785767 - 785854 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 785941 - 786010 | Not Available |
| gdsl-like lipase/acylhydrolase family protein | BCL90_0624 | Not Available | Positive | 786334 - 787629 | 45610.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
