Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase involved in cell wall biosynthesis | BCL90_4059 | Not Available | Positive | 4557611 - 4558720 | 42488.9 |
| gdpmannose 4,6-dehydratase | BCL90_4060 | Not Available | Positive | 4558717 - 4559682 | 36349.8 |
| glycosyltransferase involved in cell wall biosynthesis | BCL90_4061 | Not Available | Positive | 4559666 - 4560400 | 28141.6 |
| oligosaccharide repeat unit polymerase | BCL90_4062 | Not Available | Positive | 4560397 - 4561716 | 50330.5 |
| glycosyltransferase involved in cell wall biosynthesis | BCL90_4063 | Not Available | Positive | 4561706 - 4562605 | 35319.2 |
| glycosyltransferase involved in cell wall biosynthesis | BCL90_4064 | Not Available | Positive | 4562599 - 4563729 | 42643.9 |
| udp-glucose 4-epimerase | BCL90_4065 | Not Available | Positive | 4563726 - 4564661 | 35083.4 |
| glycosyl transferase family 2 | BCL90_4066 | Not Available | Positive | 4564654 - 4565475 | 31732.9 |
| nucleoside-diphosphate-sugar epimerase | BCL90_4067 | Not Available | Positive | 4565472 - 4566365 | 32420.1 |
| gdpmannose 4,6-dehydratase | BCL90_4068 | Not Available | Positive | 4566367 - 4567494 | 42328.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
