Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_4018 | Not Available | - | 4514142 - 4514306 | 6098.35 |
| hypothetical protein | BCL90_4019 | Not Available | - | 4514348 - 4514803 | 17255.6 |
| protein-tyrosine phosphatase | BCL90_4020 | Not Available | - | 4514883 - 4515215 | 13149.9 |
| uracil phosphoribosyltransferase | BCL90_4021 | Not Available | - | 4515270 - 4515950 | 25132.6 |
| hypothetical protein | BCL90_4022 | Not Available | - | 4515934 - 4517274 | 51528.5 |
| hypothetical protein | BCL90_4023 | Not Available | - | 4517411 - 4517917 | 19170.4 |
| hupe/urej protein | BCL90_4024 | Not Available | + | 4518109 - 4518693 | 22140.0 |
| peptidase m1-like protein | BCL90_4025 | Not Available | + | 4518704 - 4521076 | 89564.0 |
| hypothetical protein | BCL90_4026 | Not Available | - | 4521161 - 4522321 | 43615.1 |
| excinuclease abc subunit b | BCL90_4027 | Not Available | + | 4522532 - 4524574 | 77569.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
