Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3998 | Not Available | - | 4492704 - 4492889 | 6650.32 |
| putative endopeptidase | BCL90_3999 | Not Available | - | 4493002 - 4495044 | 77235.7 |
| regulator of protease activity hflc (stomatin/prohibitin superfamily) | BCL90_4000 | Not Available | + | 4495134 - 4496066 | 34681.0 |
| nucleoside-diphosphate-sugar epimerase | BCL90_4001 | Not Available | + | 4496270 - 4497163 | 31763.8 |
| helix-turn-helix protein | BCL90_4002 | Not Available | + | 4497172 - 4498092 | 35299.4 |
| carboxyl-terminal processing protease | BCL90_4003 | Not Available | - | 4498161 - 4500350 | 80962.7 |
| hypothetical protein | BCL90_4004 | Not Available | - | 4500597 - 4501286 | 25742.9 |
| l-asparaginase | BCL90_4005 | Not Available | - | 4501316 - 4502158 | 29836.0 |
| cyanophycinase | BCL90_4006 | Not Available | - | 4502244 - 4503119 | 31402.0 |
| cyanophycin synthetase | BCL90_4007 | Not Available | + | 4503416 - 4506031 | 96611.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
