Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thiol-disulfide isomerase/thioredoxin | BCL90_3958 | Not Available | - | 4449884 - 4450996 | 42031.4 |
| hypothetical protein | BCL90_3959 | Not Available | + | 4451131 - 4452012 | 33138.4 |
| aminopeptidase n | BCL90_3960 | Not Available | + | 4452115 - 4454625 | 93713.7 |
| tetratricopeptide repeat protein | BCL90_3961 | Not Available | + | 4455922 - 4457325 | 54817.9 |
| phosphosulfolactate synthase | BCL90_3962 | Not Available | + | 4457386 - 4458153 | 28736.7 |
| shikimate dehydrogenase | BCL90_3963 | Not Available | + | 4458238 - 4458981 | 27341.9 |
| gliding motility-associated lipoprotein gldd | BCL90_3964 | Not Available | + | 4459057 - 4459644 | 23167.8 |
| glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii) | BCL90_3965 | Not Available | + | 4459694 - 4460332 | 23564.9 |
| lipoprotein-releasing system permease protein | BCL90_3966 | Not Available | + | 4460430 - 4461665 | 45552.6 |
| nlpe-like protein | BCL90_3967 | Not Available | + | 4461667 - 4462047 | 13983.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
