Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-glucuronate isomerase | BCL90_3938 | Not Available | Positive | 4423874 - 4425274 | 53650.3 |
| 2-dehydro-3-deoxygluconokinase | BCL90_3939 | Not Available | Positive | 4425388 - 4426443 | 39039.5 |
| 2-dehydro-3-deoxyphosphogluconate aldolase/(4s)-4-hydroxy-2-oxoglutarate aldolase | BCL90_3940 | Not Available | Positive | 4426436 - 4427098 | 24120.6 |
| acs family hexuronate transporter-like mfs transporter | BCL90_3941 | Not Available | Positive | 4427119 - 4428558 | 53501.9 |
| acyl-coa reductase-like nad-dependent aldehyde dehydrogenase | BCL90_3942 | Not Available | Positive | 4428670 - 4430295 | 60381.9 |
| hypothetical protein | BCL90_3943 | Not Available | Positive | 4430630 - 4430917 | 10603.9 |
| lysophospholipase l1-like esterase | BCL90_3944 | Not Available | Negative | 4430797 - 4431537 | 27417.2 |
| pectinesterase | BCL90_3945 | Not Available | Negative | 4431542 - 4432564 | 38346.0 |
| fibronectin type iii domain protein | BCL90_3946 | Not Available | Negative | 4432639 - 4434204 | 55517.0 |
| putative outer membrane starch-binding protein | BCL90_3947 | Not Available | Negative | 4434216 - 4436009 | 66781.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
