Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3927 | Not Available | Positive | 4408912 - 4410198 | 46355.6 |
| putative membrane protein | BCL90_3929 | Not Available | Negative | 4410835 - 4411725 | 34041.3 |
| putative mfs family arabinose efflux permease | BCL90_3930 | Not Available | Positive | 4411805 - 4413400 | 58385.0 |
| hypothetical protein | BCL90_3931 | Not Available | Positive | 4413412 - 4413663 | 9564.04 |
| pectinesterase | BCL90_3932 | Not Available | Positive | 4414473 - 4415429 | 35806.3 |
| pectate lyase-like protein | BCL90_3933 | Not Available | Positive | 4415589 - 4417262 | 60467.0 |
| unsaturated rhamnogalacturonyl hydrolase | BCL90_3934 | Not Available | Positive | 4417270 - 4419201 | 71897.9 |
| pela/pel-15e family pectate lyase | BCL90_3935 | Not Available | Positive | 4419399 - 4420412 | 38060.5 |
| tagaturonate reductase | BCL90_3936 | Not Available | Positive | 4420462 - 4422021 | 58071.5 |
| altronate hydrolase | BCL90_3937 | Not Available | Positive | 4422023 - 4423669 | 59655.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
