Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative purr-regulated permease perm | BCL90_3917 | Not Available | Positive | 4401599 - 4402648 | 39364.5 |
| gas vesicle protein | BCL90_3918 | Not Available | Positive | 4402720 - 4402986 | 9357.99 |
| putative superfamily iii holin-x | BCL90_3919 | Not Available | Positive | 4403040 - 4403417 | 14104.2 |
| hypothetical protein | BCL90_3920 | Not Available | Positive | 4403404 - 4403841 | 16483.2 |
| aspartyl-trna synthetase | BCL90_3921 | Not Available | Negative | 4404020 - 4405765 | 66068.1 |
| mrna interferase higb | BCL90_3922 | Not Available | Positive | 4405899 - 4406228 | 12848.7 |
| hth-type transcriptional regulator/antitoxin higa | BCL90_3923 | Not Available | Positive | 4406231 - 4406587 | 13506.5 |
| hypothetical protein | BCL90_3924 | Not Available | Negative | 4406738 - 4407142 | 15804.1 |
| rna polymerase sigma-70 factor (ecf subfamily) | BCL90_3925 | Not Available | Positive | 4407679 - 4408236 | 21752.1 |
| hypothetical protein | BCL90_3926 | Not Available | Positive | 4408229 - 4408756 | 20220.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
