Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi-like enzyme | BCL90_3907 | Not Available | Positive | 4388149 - 4388643 | 18653.6 |
| outer membrane receptor protein involved in fe transport | BCL90_3908 | Not Available | Negative | 4388784 - 4391225 | 90931.3 |
| histidine kinase | BCL90_3909 | Not Available | Positive | 4391521 - 4393161 | 62098.0 |
| lyttr family two component transcriptional regulator | BCL90_3910 | Not Available | Positive | 4393169 - 4393915 | 28233.4 |
| peptidase m49-like protein | BCL90_3911 | Not Available | Negative | 4394053 - 4395810 | 65804.1 |
| n-acetylmuramoyl-l-alanine amidase | BCL90_3912 | Not Available | Positive | 4395846 - 4396682 | 30799.7 |
| glutaminyl-trna synthetase | BCL90_3913 | Not Available | Negative | 4396993 - 4398648 | 63427.0 |
| isobutyryl-coa mutase small subunit | BCL90_3914 | Not Available | Positive | 4398765 - 4399184 | 15131.6 |
| enoyl-coa hydratase | BCL90_3915 | Not Available | Positive | 4399188 - 4399967 | 27620.3 |
| two-component system response regulator hydg | BCL90_3916 | Not Available | Positive | 4400116 - 4401534 | 52878.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
