Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rhodanese-related sulfurtransferase | BCL90_3897 | Not Available | Negative | 4374504 - 4374821 | 11956.3 |
| uncharacterized protein duf4407 | BCL90_3898 | Not Available | Positive | 4374949 - 4376073 | 42569.0 |
| peptidase m28-like protein | BCL90_3899 | Not Available | Positive | 4376265 - 4377572 | 48119.3 |
| carbamoyl-phosphate synthase large subunit | BCL90_3900 | Not Available | Negative | 4377734 - 4380571 | 104912.0 |
| hypothetical protein | BCL90_3901 | Not Available | Negative | 4380780 - 4381097 | 11105.7 |
| nadr type nicotinamide-nucleotide adenylyltransferase | BCL90_3902 | Not Available | Positive | 4381533 - 4382063 | 20342.5 |
| iron complex outermembrane receptor protein | BCL90_3903 | Not Available | Positive | 4382873 - 4385284 | 89828.1 |
| thiamine-phosphate diphosphorylase | BCL90_3904 | Not Available | Positive | 4385532 - 4386176 | 23732.1 |
| hypothetical protein | BCL90_3905 | Not Available | Positive | 4386236 - 4387528 | 50106.7 |
| hypothetical protein | BCL90_3906 | Not Available | Positive | 4387592 - 4388152 | 21096.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
