Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tyrosine lyase thih | BCL90_3877 | Not Available | Negative | 4355188 - 4356315 | 43267.5 |
| thiazole-phosphate synthase | BCL90_3878 | Not Available | Negative | 4356302 - 4357072 | 27512.4 |
| thiamine-phosphate diphosphorylase | BCL90_3879 | Not Available | Negative | 4357084 - 4357719 | 22759.8 |
| thiamine-phosphate pyrophosphorylase | BCL90_3880 | Not Available | Negative | 4357719 - 4358330 | 23258.1 |
| hydroxymethylpyrimidine synthase | BCL90_3881 | Not Available | Negative | 4358334 - 4360217 | 69962.5 |
| sulfur carrier protein this | BCL90_3882 | Not Available | Negative | 4360303 - 4360506 | 7328.71 |
| hypothetical protein | BCL90_3883 | Not Available | Positive | 4360547 - 4360687 | 5097.43 |
| leucine-rich repeat (lrr) protein | BCL90_3884 | Not Available | Positive | 4361013 - 4362314 | 47798.8 |
| hypothetical protein | BCL90_3885 | Not Available | Negative | 4362500 - 4363216 | 27281.9 |
| crp-like camp-binding protein | BCL90_3886 | Not Available | Positive | 4363322 - 4363888 | 21944.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
