Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp-like camp-binding protein | BCL90_3815 | Not Available | Positive | 4287600 - 4288169 | 22410.5 |
| hypothetical protein | BCL90_3816 | Not Available | Positive | 4288362 - 4288841 | 18223.7 |
| hypothetical protein | BCL90_3817 | Not Available | Positive | 4288943 - 4289323 | 13833.5 |
| susd-like starch-binding protein associating with outer membrane | BCL90_3818 | Not Available | Negative | 4289371 - 4290771 | 52367.6 |
| tonb-linked susc/raga family outer membrane protein | BCL90_3819 | Not Available | Negative | 4290782 - 4293997 | 119087.0 |
| thiol-disulfide isomerase/thioredoxin | BCL90_3820 | Not Available | Negative | 4294012 - 4294590 | 21959.9 |
| hypothetical protein | BCL90_3821 | Not Available | Positive | 4295650 - 4296024 | 13751.6 |
| hypothetical protein | BCL90_3822 | Not Available | Positive | 4296053 - 4296205 | 5760.36 |
| leucine rich repeat (lrr) protein | BCL90_3823 | Not Available | Positive | 4296327 - 4300412 | 157457.0 |
| site-specific dna-methyltransferase (cytosine-n4-specific) | BCL90_3824 | Not Available | Positive | 4300870 - 4301859 | 37565.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
