Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellum-specific peptidoglycan hydrolase flgj | BCL90_3771 | Not Available | Negative | 4224864 - 4225706 | 32014.7 |
| flagellum-specific peptidoglycan hydrolase flgj | BCL90_3772 | Not Available | Negative | 4225773 - 4226447 | 25639.8 |
| putative o-methyltransferase yrrm | BCL90_3773 | Not Available | Negative | 4226531 - 4227166 | 24035.0 |
| putative holliday junction resolvase | BCL90_3774 | Not Available | Negative | 4227174 - 4227590 | 15700.1 |
| dna polymerase-3 subunit delta' | BCL90_3775 | Not Available | Positive | 4227939 - 4229087 | 42985.9 |
| cell fate regulator yaat (psp1 superfamily) | BCL90_3776 | Not Available | Positive | 4229089 - 4230588 | 55963.6 |
| gliding motility-associated lipoprotein gldh | BCL90_3777 | Not Available | Positive | 4230557 - 4231048 | 18850.9 |
| iron complex outermembrane receptor protein | BCL90_3778 | Not Available | Positive | 4231214 - 4234072 | 102532.0 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | BCL90_3779 | Not Available | Negative | 4234287 - 4235588 | 47860.8 |
| zinc carboxypeptidase | BCL90_3780 | Not Available | Positive | 4235672 - 4238170 | 93692.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
