Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mscs family membrane protein | BCL90_3741 | Not Available | Positive | 4192795 - 4193970 | 43979.8 |
| phosphatidylserine decarboxylase | BCL90_3742 | Not Available | Negative | 4194316 - 4194975 | 24945.3 |
| hypoxanthine phosphoribosyltransferase | BCL90_3743 | Not Available | Negative | 4195031 - 4195573 | 20120.5 |
| transglycosylase | BCL90_3744 | Not Available | Negative | 4195664 - 4197826 | 81122.0 |
| atp-binding protein involved in chromosome partitioning | BCL90_3745 | Not Available | Positive | 4197958 - 4199034 | 38318.4 |
| fe-s cluster biogenesis protein nfua | BCL90_3746 | Not Available | Positive | 4199069 - 4199314 | 8707.6 |
| hypothetical protein | BCL90_3747 | Not Available | Positive | 4199368 - 4200003 | 23969.0 |
| peptide deformylase | BCL90_3748 | Not Available | Negative | 4200192 - 4200752 | 21263.7 |
| putative zn-dependent peptidase | BCL90_3749 | Not Available | Negative | 4200943 - 4202175 | 46274.4 |
| hypothetical protein | BCL90_3750 | Not Available | Negative | 4202202 - 4202654 | 16662.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
