Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiol:disulfide interchange protein dsbd | BCL90_3731 | Not Available | Positive | 4185366 - 4187063 | 61764.9 |
| 6-phosphofructokinase | BCL90_3732 | Not Available | Positive | 4187023 - 4188039 | 36682.2 |
| uncharacterized protein ybjq (upf0145 family) | BCL90_3733 | Not Available | Negative | 4188126 - 4188449 | 11144.5 |
| hypothetical protein | BCL90_3734 | Not Available | Positive | 4188617 - 4188724 | 3837.87 |
| 5'(3')-deoxyribonucleotidase | BCL90_3735 | Not Available | Negative | 4188850 - 4189371 | 20462.5 |
| small subunit ribosomal protein s16 | BCL90_3736 | Not Available | Positive | 4189516 - 4190076 | 19839.3 |
| 16s rrna processing protein rimm | BCL90_3737 | Not Available | Positive | 4190217 - 4190744 | 20488.2 |
| hypothetical protein | BCL90_3738 | Not Available | Positive | 4191027 - 4191461 | 15973.4 |
| trna (guanine37-n1)-methyltransferase | BCL90_3739 | Not Available | Positive | 4191564 - 4192238 | 25032.9 |
| large subunit ribosomal protein l19 | BCL90_3740 | Not Available | Positive | 4192377 - 4192724 | 13060.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
