Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | BCL90_3721 | Not Available | Negative | 4175057 - 4176133 | 39260.2 |
| luxr family two component transcriptional regulator | BCL90_3722 | Not Available | Negative | 4176212 - 4176862 | 24398.9 |
| signal transduction histidine kinase | BCL90_3723 | Not Available | Negative | 4176862 - 4178739 | 72661.9 |
| hypothetical protein | BCL90_3724 | Not Available | Positive | 4178884 - 4179876 | 37242.8 |
| v8-like glu-specific endopeptidase | BCL90_3725 | Not Available | Positive | 4179915 - 4180694 | 29447.8 |
| l-lactate dehydrogenase complex protein lldg | BCL90_3726 | Not Available | Negative | 4180815 - 4181498 | 26201.6 |
| cell division protease ftsh | BCL90_3727 | Not Available | Negative | 4181522 - 4183537 | 73890.1 |
| ribosome-associated protein | BCL90_3728 | Not Available | Negative | 4183566 - 4183940 | 14092.6 |
| bira family biotin operon repressor/biotin-[acetyl-coa-carboxylase] ligase | BCL90_3729 | Not Available | Positive | 4183985 - 4184761 | 29240.2 |
| disulfide bond corrector protein dsbc | BCL90_3730 | Not Available | Positive | 4184768 - 4185217 | 16794.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
