Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc carboxypeptidase | BCL90_3711 | Not Available | Positive | 4164069 - 4164443 | 14026.8 |
| putative dsba family dithiol-disulfide isomerase | BCL90_3712 | Not Available | Positive | 4164543 - 4165259 | 27060.7 |
| hypothetical protein | BCL90_3713 | Not Available | Negative | 4165468 - 4165686 | 8432.64 |
| hypothetical protein | BCL90_3714 | Not Available | Negative | 4165687 - 4166823 | 43590.5 |
| transcription-repair coupling factor | BCL90_3715 | Not Available | Negative | 4166915 - 4170253 | 126419.0 |
| uncharacterized protein duf2752 | BCL90_3716 | Not Available | Positive | 4170555 - 4170857 | 11491.0 |
| tm2 domain-containing protein | BCL90_3717 | Not Available | Positive | 4170863 - 4171249 | 14332.8 |
| dinuclear metal center ybgi/sa1388 family protein | BCL90_3718 | Not Available | Positive | 4171562 - 4172659 | 40998.3 |
| hypothetical protein | BCL90_3719 | Not Available | Positive | 4172659 - 4173402 | 28290.9 |
| tetratricopeptide repeat protein | BCL90_3720 | Not Available | Positive | 4173516 - 4175060 | 57832.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
