Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/d-amino acid oxidase-like deaminating enzyme | BCL90_3701 | Not Available | Negative | 4153913 - 4155049 | 42300.7 |
| hypothetical protein | BCL90_3702 | Not Available | Positive | 4155133 - 4155828 | 25485.0 |
| apag protein | BCL90_3703 | Not Available | Negative | 4156278 - 4156664 | 14559.3 |
| pp_03531 | BCL90_3704 | Not Available | Negative | 4156700 - 4157707 | Not Available |
| hypothetical protein | BCL90_3705 | Not Available | Positive | 4157751 - 4158677 | 34761.5 |
| putative signal transducing protein | BCL90_3706 | Not Available | Positive | 4158658 - 4158864 | 7562.96 |
| phosphatidate cytidylyltransferase | BCL90_3707 | Not Available | Positive | 4158912 - 4159721 | 30597.1 |
| methyltransferase family protein | BCL90_3708 | Not Available | Negative | 4159851 - 4160516 | 24788.3 |
| acyl-coa hydrolase | BCL90_3709 | Not Available | Negative | 4160578 - 4160964 | 14394.4 |
| methionine synthase (b12-independent) | BCL90_3710 | Not Available | Negative | 4161081 - 4163414 | 88915.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
