Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding cassette subfamily f protein uup | BCL90_3691 | Not Available | Positive | 4139050 - 4140912 | 70427.8 |
| trna uridine 5-carboxymethylaminomethyl modification enzyme | BCL90_3692 | Not Available | Positive | 4141153 - 4143015 | 69010.9 |
| ig-like domain-containing protein | BCL90_3693 | Not Available | Positive | 4143137 - 4144780 | 62171.7 |
| carbonic anhydrase/acetyltransferase-like protein (isoleucine patch superfamily) | BCL90_3694 | Not Available | Negative | 4144875 - 4145387 | 18422.3 |
| l-aspartate oxidase | BCL90_3695 | Not Available | Negative | 4145459 - 4147045 | 59668.1 |
| quinolinate synthetase | BCL90_3696 | Not Available | Positive | 4147441 - 4148493 | 39233.4 |
| na+/h+-dicarboxylate symporter | BCL90_3697 | Not Available | Positive | 4148602 - 4149840 | 44366.4 |
| thiamine-phosphate kinase | BCL90_3698 | Not Available | Positive | 4149963 - 4151003 | 38289.8 |
| dna recombination protein rmuc | BCL90_3699 | Not Available | Negative | 4151181 - 4152566 | 52495.7 |
| formyltetrahydrofolate deformylase | BCL90_3700 | Not Available | Positive | 4152685 - 4153524 | 31611.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
