Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dha2 family multidrug resistance protein | BCL90_3681 | Not Available | Negative | 4123611 - 4125158 | 55898.3 |
| membrane fusion protein (multidrug efflux system) | BCL90_3682 | Not Available | Negative | 4125166 - 4126203 | 37219.3 |
| outer membrane protein tolc | BCL90_3683 | Not Available | Negative | 4126212 - 4127531 | 48644.5 |
| tetr family transcriptional regulator | BCL90_3684 | Not Available | Negative | 4127528 - 4128154 | 23679.9 |
| hypothetical protein | BCL90_3685 | Not Available | Positive | 4128901 - 4129086 | 6677.23 |
| protein of unknown function (duf2911) | BCL90_3686 | Not Available | Positive | 4129183 - 4129785 | 22498.3 |
| phospholipase c | BCL90_3687 | Not Available | Negative | 4130005 - 4132377 | 88531.1 |
| glycerophosphoryl diester phosphodiesterase | BCL90_3688 | Not Available | Negative | 4132433 - 4133938 | 57173.1 |
| hypothetical protein | BCL90_3689 | Not Available | Positive | 4134333 - 4137650 | 127159.0 |
| rrna maturation rnase ybey | BCL90_3690 | Not Available | Positive | 4137862 - 4138299 | 16874.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
