Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | BCL90_3671 | Not Available | Negative | 4111975 - 4112214 | 8946.66 |
| hypothetical protein | BCL90_3672 | Not Available | Negative | 4112303 - 4112779 | 18431.2 |
| dinb family protein | BCL90_3673 | Not Available | Negative | 4112776 - 4113300 | 20535.6 |
| aldehyde dehydrogenase (nad+) | BCL90_3674 | Not Available | Negative | 4113435 - 4114832 | 51540.9 |
| hypothetical protein | BCL90_3675 | Not Available | Positive | 4114965 - 4116149 | 44544.7 |
| dipeptidyl aminopeptidase/acylaminoacyl peptidase | BCL90_3676 | Not Available | Positive | 4116308 - 4118692 | 89826.7 |
| peroxiredoxin (alkyl hydroperoxide reductase subunit c) | BCL90_3677 | Not Available | Positive | 4119009 - 4119641 | 23470.5 |
| thioredoxin | BCL90_3678 | Not Available | Positive | 4119655 - 4119963 | 11506.8 |
| hypothetical protein | BCL90_3679 | Not Available | Positive | 4119963 - 4120211 | 8994.81 |
| phosphoenolpyruvate carboxylase type 1 | BCL90_3680 | Not Available | Negative | 4120763 - 4123348 | 97830.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
