Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter family protein | BCL90_3651 | Not Available | Positive | 4097792 - 4098406 | 22927.4 |
| translation elongation factor p (ef-p) | BCL90_3652 | Not Available | Positive | 4098932 - 4099492 | 21264.1 |
| translation elongation factor p (ef-p) | BCL90_3653 | Not Available | Positive | 4099624 - 4100184 | 20961.8 |
| 5-formyltetrahydrofolate cyclo-ligase | BCL90_3654 | Not Available | Positive | 4100505 - 4101065 | 21649.4 |
| hypothetical protein | BCL90_3655 | Not Available | Positive | 4101076 - 4101234 | 6168.4 |
| formiminoglutamase | BCL90_3656 | Not Available | Negative | 4101376 - 4102347 | 35577.4 |
| imidazolonepropionase | BCL90_3657 | Not Available | Negative | 4102340 - 4103581 | 45253.5 |
| exodeoxyribonuclease-3 | BCL90_3658 | Not Available | Negative | 4103672 - 4104439 | 29552.2 |
| hypothetical protein | BCL90_3659 | Not Available | Positive | 4104610 - 4104840 | 9006.9 |
| plasmid stabilization system protein pare | BCL90_3660 | Not Available | Positive | 4104831 - 4105121 | 11355.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
