Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter alluvionis |
| Strain | strain DSM 19624 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 16 |
| Temperature range | psychrotolerant |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1859053 bp
Thymine Count
1859250 bp
Guanine Count
1162087 bp
Cytosine Count
1155672 bp
Genome Length
6037645 bp
Protein-coding Genes
4997 genes
Non-Coding Genes
196 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase superfamily protein (branch 1) | BCL90_3641 | Not Available | Positive | 4087639 - 4088139 | 18850.8 |
| d-alanyl-d-alanine dipeptidase | BCL90_3642 | Not Available | Negative | 4088330 - 4089016 | 26278.0 |
| alanine dehydrogenase | BCL90_3643 | Not Available | Negative | 4089090 - 4090316 | 44580.4 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | BCL90_3644 | Not Available | Negative | 4090390 - 4090836 | 17248.7 |
| response regulator receiver domain-containing protein | BCL90_3645 | Not Available | Negative | 4090992 - 4092545 | 60538.5 |
| hypothetical protein | BCL90_3646 | Not Available | Positive | 4092657 - 4093880 | 46540.2 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | BCL90_3647 | Not Available | Positive | 4094003 - 4095079 | 38604.7 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | BCL90_3648 | Not Available | Positive | 4095069 - 4096481 | 52264.5 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | BCL90_3649 | Not Available | Positive | 4096481 - 4097266 | 28576.5 |
| acetyltransferase (gnat) family protein | BCL90_3650 | Not Available | Positive | 4097310 - 4097777 | 17193.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
